CDS

Accession Number TCMCG020C01563
gbkey CDS
Protein Id RAL54435.1
Location join(4118890..4118961,4119060..4119182,4120147..4120304,4120636..4120680,4126537..4126615,4126707..4126780,4128852..4128958,4130411..4130593,4131981..4132184,4133100..4133298,4133537..4133611,4133717..4134051,4134480..4134666,4135101..4135350,4135445..4135784,4135939..4136119,4136511..4136651,4136783..4137044,4137134..4137556,4138848..4139311,4142372..4142508,4142660..4142841,4142966..4143322,4143545..4143670,4144143..4144208,4144305..4146127,4146212..4146488,4148562..4148792,4149231..4149743,4149933..4150095,4150183..4150439)
Organism Cuscuta australis
locus_tag DM860_001563

Protein

Length 2677aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA394036, BioSample:SAMN07347267
db_source NQVE01000009.1
Definition hypothetical protein DM860_001563 [Cuscuta australis]
Locus_tag DM860_001563

EGGNOG-MAPPER Annotation

COG_category V
Description Small subunit processome component 20 homolog
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03009        [VIEW IN KEGG]
KEGG_ko ko:K14772        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs -

Sequence

CDS:  
ATGGAGGCTATGTCCGATGCTATGGCCGCTGATTCCCCCGAGAAGCCCTTCTGCCGTCCCCGCAACTTTGTTTTCAAGAGATTTTCGCAGCGAATTCAGGACATTGATATCAATGTATACAGGAGTCTCGACCCCATTAAAGCTGAGCCATCTGAAGGATCCTCGTTTTTTCGCGATTGTCTTGTAGAATACAGAGAATTAAACACAGCAGAGGATTTCATTTCATTTTATGAAGACATGTTGCCCTTGGTACAGACACTACCTCAAATTGTGCTGCAGAAGGAATTAATACTCTCGGAGCTTCTTTCTAGATTGCACATGAAGGGCAAACTATCACTTGAACCCATTTTAAGGCTAATTGCAGCTTTGTCTAGAGATTTGGTGGATGACTTCTTACCGTTTCTTCATAGGGTTGCCAATTCTTTTGTAGCTCTTCTAAAAAATGGTGCTGATAGAGAACCTGAAATAATTGAGCAGATTTTTAGGTCATTGTCATGCATTATGATGTACCTACAGAAGTACCTTACAAATGATGTTGTTCATGTTCTAAAGGCTACCGTAAAATTGAGATACTTTCCCAAAGTGTACGTGCAAGAATTCATGGCGGAGTCACTATCATTCTTGTTGAGAAATGCTTCTTTACAGCAACTTAAAAAAGGGATTCAACACTTGATGCTTGAAGTTTCGAAGAAACCATCACTAACCAGAAAGTCCGCAATCAGTTCCTTACTATTATATACGATGATAGGAACTCCATCAAGATTTCATTCAAGGGCTGATAATGTTTTGTACCTTCTGATTGGTAACTCCCTTTATAGCATTGCCGATCATTTTGATGGAGGCTCAGGAACTGTTCTTGAAGTTGTTGTTAGTGCGTTTCAAAGGTTGTGTGAGAATGTGAAGCCTAACGAGCTAGATTTGATGTGGGGTTGCTTAGTAAAGGGAATAACTAACAATGCTACAAGTGGTGACTCAGTGCATCTTTGCCGGCTTTTATCACTGCTTATTTCTACTGTGCAAAAGAAATATGTGGAAAAATTTTCTGATTATCAACAAGTTCTTGAAGTAATCAGTTTGCTAGTACGGACTTACTTCGGTGAGATGATGGATCCGGCACCAGAGCTTGTTGACAAAATTTTGTTGTTGATACTTTGTACTGTTGATGGCCTTCACAAAGCTAATAAGATGTCAGATCTCACCTGTTTCTCACAGTGGGATCCTTTGTTTGATTTGAGGAATAAAAGTTTGGCTACATTTGTGAAAGATTTTCTCTCAAAGGACCTTTCTGTCATCCATTTGTTTCGAGCCAACATTATAAGCGCATTAATTTTGTTACTAGAGATTTCAGAGGATGAGTTCATAGAATTGATGTACATGTTTTGTGAGAGGATACCAGTACATTGGAAGAGCTTCTTTGATGGAGTACCTGAAGAGAAAATGTCAAGAATTTGTACTTTCTTTGAGAAAGCTATAAATCTTTGGATTCAGCGCATCAGCGATGTGAAAGAAAATGGGGTTTCCTTTCAAGAGAATAGTTTGGGATTCCTGTGGGGAATAAGTGGATGCTATCCGTACATGAACGATGGCAGAGCAAATCCTTCCCTTCTTATGGACTTAATGTATGCTATAGATGATCTTTTAAAGGTGAAGTCAGACTTATGTACAAAAGCATGGCAATGCTTGATTGGTTCTACTTTAAGTTCTTTTCTTAAGTTACTGGATGTTCAAAATGCTGCATTGATGGAGTCTGAAGTGAGTAAATTTTTAGATCTTGCAAGAAGGCACAGATTGTGCCCTCAGATATTGTCTGGGGTGGCTGATATCTTGGATTCTATTTATGGATTCAGAAAACAAGCCGCTGATAATCCTATTCAGCACTATCATCCAGAACTTGGTGCAAGTGAAGTTGTGACTGCTCTAGATATATTTTCTGAAAATTTATGCCACCGTGACAAGGAAATCCGCCTTTCTACTTTAAGAATCTTGTGCCATTATGAACCCATGTGTGATGGATATTCTAGAAAGGAACTTACTGAGAAAAAACAAAGTGATGATCCTCAAGCATGTGCTGTATCTGACCTGGGCTGTAATGTTGTTCAGCTCCTTCTGTCAATAGAAGAAATGCCTTTGTCAATTGCTGCCAGCAGAAAACTTGAACTACTTGTATCTAAAATACAAAGGAGTCTATCATCTGCAAGGATACATGAACATCTCATTCCTGTAGCTTTGAATGGTGTAATAGGGATCCTTTACAACAAATTCAGTTACTTATGGAGTCCTGTTTTGGAATGCATTTCTGTCTTACTTGAGAATTACCATGGGATGCTTTGGGATGGATATGTGAAGTACCTTGATTACTGCATCTCCACCATTCTAAGTCATGATGATCAAAATTGTATGGGAAGTATTAAATCATTTGGAAATGATGATGGTTTGAACGGGCGATTCTGGTCTTACTGTTCTTCAATGTCAGAAAGTACTTCGTCTCCAAAAGTTTTTTCTTTGCTTATTCAATCATTACAGAGAGTTTCATCTGTTGCTGAATCTCGTTCTCGGCAAGTAGTACCATTGTTTTTGAAATTCCTGGGATATAATGTTGAAGAACTTGTGAGTGTTGATTCGTATAGCACAATGGATTTCAAAGGGGAAGAGTGGATGGTGATTCTTAGAGAATGGCTAAACCTATTCAGACTCATGAGAAATCCCAAGGCATTTTACCACAATCAATTTTTAAAAGATGTCTTACAATATAGGCTTCTTGATGAGAGTGATGCTGAGTTGCAGATGCAAGTTCTTGATTGCTTGATGCATTGGAAAGACAATTTTATGCTCCCTTACTACCAGCATCTAAAAAATTTGATCATTTCAAAAAATTTGAGAGAGGAAATCACTACTTGGAGTTTGTCAAGGGATTCACATCTCATTGACAAACAACATAGAGGTTTCCTTGTGCCTATGGTTATCCGAATACTTGCTCCAAAAGTGAGAAACATAAAAAATCTTGCATCACGAAAGGATGCAAGCATACATCTCAGGAAGGCAATTCTTGGCTTTTTAGCGCAGCTTGACATTGAAGAGTTGCCACTTTTCTTTTCCCTGTTAGTAAAGCCTCTTGTAGGAAGAGATGCAGGTTTTGTTGGAAACATTGAATCTCTTTGGAGTAAACCTCAATCCTTAAATGACGAATCTAATTTATATGAAGTCTTCAAGCATGTTGCATCAAATAACATCAGCAACCATTGGAAGAAGATAAACAGTTTTCTGCATGTGATTGAGGAGACTGTGGCTATTTTTGATGAAACACGTATTAGTCCGTTTCTTAATCTATTATTGGTATGTGTATCATGTTTGCTGGAAAGCTGCACATCGGCTCTTGACAACACAGATAGTAAGCTGATCGATGCTTATCATAGGGATGCCATCACCACCGATACTGTGACCCAAACAGCTATTGAGAAGCCGAAGGAGCTGCGATCTTTTTGTTTGAGGATCATTTCTTTTATTCTTAATGAATATGAAGATCATGATTTTAGCCCCAAATTCTGGGATTCCTTTTTCAAATCTGTGAAACCATTAATTGCTGGTTTCAAGCAGGAAGGTGCCAGTAGTGAGAAACCAAGCTCTCTATTTTCTTGCTTTCTTGCAATGAGTAGAAGCTACAAACTCGTGTCATTATTGTGTAGAGAGAAGAACCTTATTCCAGATATTTTTTCTATGTTATCCATCCCAACAGCGTCCCAGGCTATTGTTTGTTATGTTCTTAAGTTCATTGAGAATCTCTTGATCCTGGATAATGGGCAGATTGATGAAGAAAAAACTATCAAGAAATTGCTGCTTCCCCACCTTGATGTCCTTGTATCCAGTTTGCATAAACGCTTTGTGAGTAATGGATCAAGCAAAAGGAAACTCACTACATATCCAGCAAGAAATGAACTGAATGTTTTCAAGCTGTTATCAAAGTACATAGATGATCCTTTAGCCGCAAAGAAATTTGTTGATGTTTTGCTTCCACTTTTATCAAAGAAATCTCATACTTCTGATATATGCGTGGACACGCTGCAGATTCTTAGGCATGTAGTAAGACCAATAGAGAATAAAAGTGTTAAAAATATTCTCAAATCAGTGTCTCCACTTCTTATATCTGGTGGTCCAGATATCAGGAGTTCTGTTTGTGATGTTCTTGATGCTCTTGCTGGAAAAGATTCATCTTTACCCTTTCTGGCAAAACTGCTCCGTGAGCTGAATGCAAGTTCTGTCTCCGAAATGGGTGATCTTGAATATGATACCATAATTGCTGCTTATGGTCAGTTGAATGTAGATTTTTTCCACAATGTTGAGGAAGAACATGCATTGATGATTTTGTCAAATTCTGTACGCGACATGTCATCCGAAGAGTTGATTCTCAGGCAGAGTGCATTTAGAGTGTTATCATCTTTCATTGTATTTTCTGGTCAAATTCTTGAACTTGAAGTGAAACCCAACCATGGGTATTCTGGACCTTGGGTTATGCACATTGCAAGCACCTTTCTTTTGAAGCACATGGGAAATGCAATGAACAAAGAGGGCCCAGTTAGAAAGTCATGGATTGATCTACTGCGTGAAATGGTGTTGAAGCTTCATAAGATGACAGAATTCAATACATGTTCTGTTCTGTGCAGTGAAGATCCCGAACAGGATTTTTTCAACAACATTGTTCATTTACAGAGGTCCAGAAGGGCTAAGGCTCTATCTCGTTTTGGCAATGTAGTCAGTTCCAGGAGTTTCTCTAAGGGTATTATTGAGAGAGTTTTTGTTCCTCTCATTTTCAATATGCTATTAGATTTACAAAAAGGGAATGGTGAAAATATCAGAAGTACATGCATAAATGCTCTTGCATCAGTTTCAAAGTGGATGGACTGGAAGGCATACTATGGATTACTTTTGAGATGCTTTCATAAGATGACTCTACAACCTGACAAACAGAAGATGTTAATGCGGCTTATATGTTCCATACTTGACCAATTCCATTTTTCAGAAGCAAATTTTGTTTGTGAAATTAAAGGTTCTACAGAGAATATTCCAAATCCTGGCACCAGTAAAGAACCATCTAAATTGCCAGCAACCTTTCCTGGATTTGTTGATACTTCTAAAATTCAGACTTGCCTTCAGAAAGATGTGCTTCCTAGGGTACAAAAGTTCTTGATGTGCGATTCTGAACATGTGAATGTAACTATAAGTTTAGTGGCCCTCAAGGTGCTGAAATTACTGCCTCGTGACAATATGGAATTGCAACTTCCAAGTATCATACATCGCATCTCCAACTTCCTTAAGAATCGTTTAGAGAGTGTGCGTGATGAAGCTAGATTTGCCTTGGCAGCTTGCTTGAAGGAGCTGGGATTGGAATACATGCAATTTATCATTAAAGTCTTGCGGGGCACTCTGAAAAGAGGATTCGAATTGCATGTTTTGGGATACACACTGAATTTTATATTGACAAAATTTCTTCTAAACCATGCTAGTCTAAACTTGGACTATTGTCTGGAAGATCTTCTTTCTGTTGCTGAAAATGATATTCTTGGAGATGTTGCTGAAGAGAAAGAAGTGGAGAAGATTGCTTCAAAAATGAAAGAGACTAGAAAGCAGAAGTCCTATGAGACACTCAAGTTGATTGCACAGAGCATCACTTTCAAAACCCATGCCTTAAAGCTTCTTTCGCCTGTTACTGTACATCTACAAAAGCAGTTGACTCCAAAAGAGAAATCAAAATTGGAGAACATGCTGAATCATATAGCCGATGGTATACAATGCAATCCATCAGTGAATGAGAAGGAACTCTTTGTGTTTGCATATGGTCTCATCAAAGATGGCATAATGGATGAACATCTTTTTCGTGAAGATATGACCATCTTAGATGAAAGCCTACAAGATAAAGATGCATTGAGGCACGAAAACACTGCTTCAAATAGATTGGTCAATGTTCATCGGCAATGCTCCCATATGATTACAGAGTTTGCACTTGGGGTGTTGCAGAACTACCTGAAAAACATGAAATTAGACAAAGGGGATGAAAAGTTATTATCAATGCTAGACCCTTTTGTAAGGCTATTAGGGGATTGTTTAAGTTCAAAATATGAGAATATCATATTTGCATCACTAAAATCCCTATATTCAATAGTAAGGCTACCTTTGCCATCCCTTGAAAATGAAGCTGACCGGATTAAAAATTCATTGTTGGATATTGCTCAAGGTTCAACAAATGCCAGTACTCCATTGATGGAATCATGCATCAAATTGTTAACACTGCTTCTGCGTATGACCACAATGAGTCTTTCCACAACGCAACTCCAATCACTTGTTCAATTTCCTTTTTTTGTTGATCTTGAAAGAAATCCTTCATTTTTGGCCCTCTCGTTGTTGAAAGCTATAATTATCCGAAAGTTGGTGGCTCCTGAAATATATGACTTTGTCAAGAGGGTTGCAGAGTTGATGGTAACAAGTCAGGTTGATTCAATTCGCAAGAAGTGCAGTCAGATTCTTCTTCAATTCTTACTTCGCTATGAGATTTCAAAGAAACGCTTTCAACAACACCTTGATTCTTTACTTGCAAATCTGAGATATGAACATTCATCTGGTAGAGGAGCTGTTCTTGAAATGCTTCATGTAATCATAATGAAATTTCCCACTAGGATAGATGAGCAGGTTCATACTATTTTTATGCATCTGGTGATATGCTTGGCTAATGACCAAGATAACAAAGTCAGATCCATGGCTGGTGCTGCCATAAAGCTGCTTGCAGGCCGTGTGAACTCTCATTCGCTTAAATCCATACTTGAGAATTGTTTTTCTTGGTATGTAGTTGAGAAGCAGCATTTGTGGAGTTCTGCAGCACAGGTTTTGGGGTTATTGGTGGAAGTGATGGGGAACAGTTTTCAGGAGTATGTTGCTCAAGTTTTACCTGTGATGAGAAATATCTTGCAATCTGCATCAGAAGTTCTTACCGATAAACAGCTAGGCATCTCGGAGGATGTAATTTCCCTTTGGAAAGAAGTATATTATTCGTTGGTTTTGTTAGAGAAGATTTTACATCAATTTATTGCACTGTGCTTCACAAAGGAGCTTGAGGACTTGTGGGAGAAAATATGTGACTTTCTTCTATATCCGCACATATGGGTGCAAAGCATATCACGTCGCCTTATAGCTTTTTACTTCGCTAGAGTTGCGGAGGATTGCAAAGAAAAAAAAGTGCTAGAGTCGTTCTTCTTAATGAGACCAAGTAGACTGTTCCACATTGCTGTTTCTCTTATTTCTCAACTGAATGTGCAGTCTGTTGACAATGATGCTGGATCTGTGATCTCACAAAATCTTGTGTTTGCCATTTGTGGTATACATGGATTACTAGTAGCCTCCAAACATCCCGGAAATGGTTCTGCCTTTGGACCTGATGAGCAAAGCCTCTTAGTAAAAGCTTTTAATTTGCTTGATCCAAAGAAGGGAAGATACATCTTTACATCTTTCAACTTTGGTCCTAATGCTCAATACGACGATGTACATAAAGCTGAGTACCAAGGCAATATGATAATTTCTAGTCTGCTCAAGAGGATGGGGAAGATTCCTATTCAGATGGAGGCAGTGCAGGCAAAAATTGTGCTGAACTGTTTCAAGGCAATTTCCACAAAACTTGTTGATGTTTCAAGGGTAATGACCTCCGAAGGCGAAGTTGACTGCCAGAGCTATGCTTATCAGATGCTGCTACCACTATATAAACTTTGTGAAGGACAAGCTGGGAAAGTAATTTCAGATGATGTGAAGCAGTTGGCTCAAGAGGTTTGTGAAAGCATTCAAAATGTTTTGGGAACACAGACTTTCGTGCAAGTTTACAGCCAAATAAGGAAAAATCTCAAGGCAAAGAGGGACAAACGGAAACAAGAGGAGAAAGTTATGGCAGTTGCGAATCCAATGCGAAGCGCCAAGAGGAAGTTGAGAATTGCAGCCAAGAGTAAAGCTAATAAGAGGAGGAAAATAATTTCCATGAAAATGAGGAGATGGATGCGGTAA
Protein:  
MEAMSDAMAADSPEKPFCRPRNFVFKRFSQRIQDIDINVYRSLDPIKAEPSEGSSFFRDCLVEYRELNTAEDFISFYEDMLPLVQTLPQIVLQKELILSELLSRLHMKGKLSLEPILRLIAALSRDLVDDFLPFLHRVANSFVALLKNGADREPEIIEQIFRSLSCIMMYLQKYLTNDVVHVLKATVKLRYFPKVYVQEFMAESLSFLLRNASLQQLKKGIQHLMLEVSKKPSLTRKSAISSLLLYTMIGTPSRFHSRADNVLYLLIGNSLYSIADHFDGGSGTVLEVVVSAFQRLCENVKPNELDLMWGCLVKGITNNATSGDSVHLCRLLSLLISTVQKKYVEKFSDYQQVLEVISLLVRTYFGEMMDPAPELVDKILLLILCTVDGLHKANKMSDLTCFSQWDPLFDLRNKSLATFVKDFLSKDLSVIHLFRANIISALILLLEISEDEFIELMYMFCERIPVHWKSFFDGVPEEKMSRICTFFEKAINLWIQRISDVKENGVSFQENSLGFLWGISGCYPYMNDGRANPSLLMDLMYAIDDLLKVKSDLCTKAWQCLIGSTLSSFLKLLDVQNAALMESEVSKFLDLARRHRLCPQILSGVADILDSIYGFRKQAADNPIQHYHPELGASEVVTALDIFSENLCHRDKEIRLSTLRILCHYEPMCDGYSRKELTEKKQSDDPQACAVSDLGCNVVQLLLSIEEMPLSIAASRKLELLVSKIQRSLSSARIHEHLIPVALNGVIGILYNKFSYLWSPVLECISVLLENYHGMLWDGYVKYLDYCISTILSHDDQNCMGSIKSFGNDDGLNGRFWSYCSSMSESTSSPKVFSLLIQSLQRVSSVAESRSRQVVPLFLKFLGYNVEELVSVDSYSTMDFKGEEWMVILREWLNLFRLMRNPKAFYHNQFLKDVLQYRLLDESDAELQMQVLDCLMHWKDNFMLPYYQHLKNLIISKNLREEITTWSLSRDSHLIDKQHRGFLVPMVIRILAPKVRNIKNLASRKDASIHLRKAILGFLAQLDIEELPLFFSLLVKPLVGRDAGFVGNIESLWSKPQSLNDESNLYEVFKHVASNNISNHWKKINSFLHVIEETVAIFDETRISPFLNLLLVCVSCLLESCTSALDNTDSKLIDAYHRDAITTDTVTQTAIEKPKELRSFCLRIISFILNEYEDHDFSPKFWDSFFKSVKPLIAGFKQEGASSEKPSSLFSCFLAMSRSYKLVSLLCREKNLIPDIFSMLSIPTASQAIVCYVLKFIENLLILDNGQIDEEKTIKKLLLPHLDVLVSSLHKRFVSNGSSKRKLTTYPARNELNVFKLLSKYIDDPLAAKKFVDVLLPLLSKKSHTSDICVDTLQILRHVVRPIENKSVKNILKSVSPLLISGGPDIRSSVCDVLDALAGKDSSLPFLAKLLRELNASSVSEMGDLEYDTIIAAYGQLNVDFFHNVEEEHALMILSNSVRDMSSEELILRQSAFRVLSSFIVFSGQILELEVKPNHGYSGPWVMHIASTFLLKHMGNAMNKEGPVRKSWIDLLREMVLKLHKMTEFNTCSVLCSEDPEQDFFNNIVHLQRSRRAKALSRFGNVVSSRSFSKGIIERVFVPLIFNMLLDLQKGNGENIRSTCINALASVSKWMDWKAYYGLLLRCFHKMTLQPDKQKMLMRLICSILDQFHFSEANFVCEIKGSTENIPNPGTSKEPSKLPATFPGFVDTSKIQTCLQKDVLPRVQKFLMCDSEHVNVTISLVALKVLKLLPRDNMELQLPSIIHRISNFLKNRLESVRDEARFALAACLKELGLEYMQFIIKVLRGTLKRGFELHVLGYTLNFILTKFLLNHASLNLDYCLEDLLSVAENDILGDVAEEKEVEKIASKMKETRKQKSYETLKLIAQSITFKTHALKLLSPVTVHLQKQLTPKEKSKLENMLNHIADGIQCNPSVNEKELFVFAYGLIKDGIMDEHLFREDMTILDESLQDKDALRHENTASNRLVNVHRQCSHMITEFALGVLQNYLKNMKLDKGDEKLLSMLDPFVRLLGDCLSSKYENIIFASLKSLYSIVRLPLPSLENEADRIKNSLLDIAQGSTNASTPLMESCIKLLTLLLRMTTMSLSTTQLQSLVQFPFFVDLERNPSFLALSLLKAIIIRKLVAPEIYDFVKRVAELMVTSQVDSIRKKCSQILLQFLLRYEISKKRFQQHLDSLLANLRYEHSSGRGAVLEMLHVIIMKFPTRIDEQVHTIFMHLVICLANDQDNKVRSMAGAAIKLLAGRVNSHSLKSILENCFSWYVVEKQHLWSSAAQVLGLLVEVMGNSFQEYVAQVLPVMRNILQSASEVLTDKQLGISEDVISLWKEVYYSLVLLEKILHQFIALCFTKELEDLWEKICDFLLYPHIWVQSISRRLIAFYFARVAEDCKEKKVLESFFLMRPSRLFHIAVSLISQLNVQSVDNDAGSVISQNLVFAICGIHGLLVASKHPGNGSAFGPDEQSLLVKAFNLLDPKKGRYIFTSFNFGPNAQYDDVHKAEYQGNMIISSLLKRMGKIPIQMEAVQAKIVLNCFKAISTKLVDVSRVMTSEGEVDCQSYAYQMLLPLYKLCEGQAGKVISDDVKQLAQEVCESIQNVLGTQTFVQVYSQIRKNLKAKRDKRKQEEKVMAVANPMRSAKRKLRIAAKSKANKRRKIISMKMRRWMR